Lutetium in PDB 4xha: Crystal Structure of Thosea Asigna Virus Rna-Dependent Rna Polymerase (Rdrp) Complexed with LU3+

The structure of Crystal Structure of Thosea Asigna Virus Rna-Dependent Rna Polymerase (Rdrp) Complexed with LU3+, PDB code: 4xha was solved by D.S.Ferrero, M.Buxaderas, J.F.Rodriguez, N.Verdaguer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	63.52 / 3.00
Space group	C 2 2 21
Cell size a, b, c (Å), α, β, γ (°)	154.050, 224.570, 128.290, 90.00, 90.00, 90.00
R / Rfree (%)	18.2 / 24.4

The binding sites of Lutetium atom in the Crystal Structure of Thosea Asigna Virus Rna-Dependent Rna Polymerase (Rdrp) Complexed with LU3+ (pdb code 4xha). This binding sites where shown within 5.0 Angstroms radius around Lutetium atom.
In total 2 binding sites of Lutetium where determined in the Crystal Structure of Thosea Asigna Virus Rna-Dependent Rna Polymerase (Rdrp) Complexed with LU3+, PDB code: 4xha:
Jump to Lutetium binding site number: 1; 2;

Lutetium binding site 1 out of 2 in the Crystal Structure of Thosea Asigna Virus Rna-Dependent Rna Polymerase (Rdrp) Complexed with LU3+


Mono view


Stereo pair view

A full contact list of Lutetium with other atoms in the Lu binding site number 1 of Crystal Structure of Thosea Asigna Virus Rna-Dependent Rna Polymerase (Rdrp) Complexed with LU3+ within 5.0Å range: probe atom residue distance (Å) B Occ A:Lu701 b:0.8 occ:1.00 OD2 A:ASP140 3.2 95.7 1.0 OD1 A:ASP140 3.4 98.0 1.0 CG A:ASP140 3.7 79.6 1.0 OD2 A:ASP142 4.4 81.7 1.0

Lutetium binding site 2 out of 2 in the Crystal Structure of Thosea Asigna Virus Rna-Dependent Rna Polymerase (Rdrp) Complexed with LU3+


Mono view


Stereo pair view

A full contact list of Lutetium with other atoms in the Lu binding site number 2 of Crystal Structure of Thosea Asigna Virus Rna-Dependent Rna Polymerase (Rdrp) Complexed with LU3+ within 5.0Å range: probe atom residue distance (Å) B Occ B:Lu701 b:0.1 occ:1.00 OD2 B:ASP142 2.4 0.4 1.0 CG B:ASP142 3.2 96.3 1.0 OD1 B:ASP142 3.5 0.3 1.0 OD1 B:ASP140 3.7 0.6 1.0 CG B:ASP140 3.8 0.8 1.0 OD2 B:ASP140 4.1 0.6 1.0 CB B:ASP140 4.2 0.8 1.0 CB B:ASP142 4.4 50.4 1.0 N B:ASP142 5.0 33.4 1.0

D.S.Ferrero, M.Buxaderas, J.F.Rodriguez, N.Verdaguer. The Structure of the Rna-Dependent Rna Polymerase of A Permutotetravirus Suggests A Link Between Primer-Dependent and Primer-Independent Polymerases. Plos Pathog. V. 11 05265 2015.
ISSN: ESSN 1553-7374
PubMed: 26625123
DOI: 10.1371/JOURNAL.PPAT.1005265