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Lutetium in PDB 2ztb: Crystal Structure of the Parasporin-2 Bacillus Thuringiensis Toxin That Recognizes Cancer Cells

Protein crystallography data

The structure of Crystal Structure of the Parasporin-2 Bacillus Thuringiensis Toxin That Recognizes Cancer Cells, PDB code: 2ztb was solved by T.Akiba, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.74 / 2.38
Space group P 65
Cell size a, b, c (Å), α, β, γ (°) 136.829, 136.829, 119.268, 90.00, 90.00, 120.00
R / Rfree (%) 19.1 / 22.2

Other elements in 2ztb:

The structure of Crystal Structure of the Parasporin-2 Bacillus Thuringiensis Toxin That Recognizes Cancer Cells also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Lutetium Binding Sites:

The binding sites of Lutetium atom in the Crystal Structure of the Parasporin-2 Bacillus Thuringiensis Toxin That Recognizes Cancer Cells (pdb code 2ztb). This binding sites where shown within 5.0 Angstroms radius around Lutetium atom.
In total 3 binding sites of Lutetium where determined in the Crystal Structure of the Parasporin-2 Bacillus Thuringiensis Toxin That Recognizes Cancer Cells, PDB code: 2ztb:
Jump to Lutetium binding site number: 1; 2; 3;

Lutetium binding site 1 out of 3 in 2ztb

Go back to Lutetium Binding Sites List in 2ztb
Lutetium binding site 1 out of 3 in the Crystal Structure of the Parasporin-2 Bacillus Thuringiensis Toxin That Recognizes Cancer Cells


Mono view


Stereo pair view

A full contact list of Lutetium with other atoms in the Lu binding site number 1 of Crystal Structure of the Parasporin-2 Bacillus Thuringiensis Toxin That Recognizes Cancer Cells within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Lu1001

b:78.2
occ:1.00
LU A:LU1003 3.4 65.1 1.0
LU B:LU1002 3.6 77.3 1.0
OE2 A:GLU183 4.0 61.0 1.0

Lutetium binding site 2 out of 3 in 2ztb

Go back to Lutetium Binding Sites List in 2ztb
Lutetium binding site 2 out of 3 in the Crystal Structure of the Parasporin-2 Bacillus Thuringiensis Toxin That Recognizes Cancer Cells


Mono view


Stereo pair view

A full contact list of Lutetium with other atoms in the Lu binding site number 2 of Crystal Structure of the Parasporin-2 Bacillus Thuringiensis Toxin That Recognizes Cancer Cells within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Lu1003

b:65.1
occ:1.00
LU A:LU1001 3.4 78.2 1.0
LU B:LU1002 3.4 77.3 1.0
OD2 A:ASP287 4.4 49.4 1.0
OD1 B:ASP287 4.4 52.2 1.0
OD2 B:ASP287 4.5 51.5 1.0
OD1 A:ASP287 4.5 46.7 1.0
CG B:ASP287 4.9 51.6 1.0
CG A:ASP287 4.9 47.9 1.0
CE1 B:PHE286 5.0 49.0 1.0
CE1 A:PHE286 5.0 45.2 1.0

Lutetium binding site 3 out of 3 in 2ztb

Go back to Lutetium Binding Sites List in 2ztb
Lutetium binding site 3 out of 3 in the Crystal Structure of the Parasporin-2 Bacillus Thuringiensis Toxin That Recognizes Cancer Cells


Mono view


Stereo pair view

A full contact list of Lutetium with other atoms in the Lu binding site number 3 of Crystal Structure of the Parasporin-2 Bacillus Thuringiensis Toxin That Recognizes Cancer Cells within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Lu1002

b:77.3
occ:1.00
LU A:LU1003 3.4 65.1 1.0
LU A:LU1001 3.6 78.2 1.0
OE2 B:GLU183 4.2 74.1 1.0
OE1 B:GLU183 4.2 71.7 1.0
CD B:GLU183 4.7 71.9 1.0

Reference:

T.Akiba, Y.Abe, S.Kitada, Y.Kusaka, A.Ito, T.Ichimatsu, H.Katayama, T.Akao, K.Higuchi, E.Mizuki, M.Ohba, R.Kanai, K.Harata. Crystal Structure of the Parasporin-2 Bacillus Thuringiensis Toxin That Recognizes Cancer Cells J.Mol.Biol. V. 386 121 2009.
ISSN: ISSN 0022-2836
PubMed: 19094993
DOI: 10.1016/J.JMB.2008.12.002
Page generated: Mon Dec 14 03:19:41 2020

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