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Lutetium in PDB 1duh: Crystal Structure of the Conserved Domain IV of E. Coli 4.5S Rna

Protein crystallography data

The structure of Crystal Structure of the Conserved Domain IV of E. Coli 4.5S Rna, PDB code: 1duh was solved by L.Jovine, T.Hainzl, C.Oubridge, W.G.Scott, J.Li, T.K.Sixma, A.Wonacott, T.Skarzynski, K.Nagai, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 22.50 / 2.70
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 69.697, 69.697, 84.102, 90.00, 90.00, 120.00
R / Rfree (%) 23 / 24.5

Other elements in 1duh:

The structure of Crystal Structure of the Conserved Domain IV of E. Coli 4.5S Rna also contains other interesting chemical elements:

Magnesium (Mg) 1 atom

Lutetium Binding Sites:

The binding sites of Lutetium atom in the Crystal Structure of the Conserved Domain IV of E. Coli 4.5S Rna (pdb code 1duh). This binding sites where shown within 5.0 Angstroms radius around Lutetium atom.
In total only one binding site of Lutetium was determined in the Crystal Structure of the Conserved Domain IV of E. Coli 4.5S Rna, PDB code: 1duh:

Lutetium binding site 1 out of 1 in 1duh

Go back to Lutetium Binding Sites List in 1duh
Lutetium binding site 1 out of 1 in the Crystal Structure of the Conserved Domain IV of E. Coli 4.5S Rna


Mono view


Stereo pair view

A full contact list of Lutetium with other atoms in the Lu binding site number 1 of Crystal Structure of the Conserved Domain IV of E. Coli 4.5S Rna within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Lu1

b:68.9
occ:0.55
OP1 A:PGP75 2.4 88.6 1.0
O5P A:PGP75 3.4 91.0 1.0
O4P A:PGP75 3.6 84.2 1.0
P A:PGP75 3.6 86.4 1.0
P1 A:PGP75 3.8 89.1 1.0
OP2 A:PGP75 4.0 87.1 1.0
O5' A:PGP75 4.2 86.0 1.0
O3' A:PGP75 4.4 87.2 1.0
C5' A:PGP75 4.5 85.3 1.0
O3' A:A74 4.8 86.2 1.0
C3' A:PGP75 4.9 83.8 1.0

Reference:

L.Jovine, T.Hainzl, C.Oubridge, W.G.Scott, J.Li, T.K.Sixma, A.Wonacott, T.Skarzynski, K.Nagai. Crystal Structure of the Ffh and Ef-G Binding Sites in the Conserved Domain IV of Escherichia Coli 4.5S Rna. Structure Fold.Des. V. 8 527 2000.
ISSN: ISSN 0969-2126
PubMed: 10801497
DOI: 10.1016/S0969-2126(00)00137-4
Page generated: Mon Dec 14 03:17:56 2020

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